探花精选

Haris Baba膷i膰

Haris Baba膷i膰

Postdoctoral Researcher
Visiting address: SciLifeLab, Tomtebodav盲gen 23A, 17121 Solna
Postal address: K7 Onkologi-Patologi, K7 Forskning Lehti枚, 171 77 Stockholm
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About me

  • I am a postdoctoral researcher in cancer proteomics, with background in medicine and epidemiology. I defended my PhD thesis at the Karolinska Institute in 2023, on . I am skilled in proteomics, proteogenomics, research design, 探花精选 statistics, machine learning, and bioinformatics.

Research

  • My research has two aims:

    1) Discovering protein biomarkers for predicting clinical outcomes, such as treatment response, progression, or survival. Our aim is to connect proteomic data to other data modalities for the aim of stratifying cancer patients, to improve clinical decision-making in patient management, primarily in treatment management. I am focused on three highly malignant cancers - glioblastoma, lung cancer, and melanoma and work mainly on plasma proteomics, i.e. analysing hundreds or thousands of proteins that are freely circulating in the liquid component of the blood called plasma.

    2) Translating discovery proteomic findings to the clinic. Our aim is to build a clinical proteomics infrastructure for testing and validating new protein biomarkers, for the final goal of integrating research findings in clinical routine.

Teaching

    • Director and examiner for the KI PhD course K7F3120 in Omics Data Analysis: From Quantitative Data to Biological Information.
    • Teaching experimental design and data analysis, KI PhD course K7F255 in Proteomics by Mass Spectrometry: When and How.

Articles

  • Article: TRANSLATIONAL ONCOLOGY. 2025;59:102468
    Sharma N; Rajova J; Mermelekas G; Thrane K; Lundeberg J; Shamikh A; Vikstrom S; Babacic H; Jensdottir M; Lehtio J; Pernemalm M; Eriksson H
  • Article: EUROPEAN JOURNAL OF NEUROLOGY. 2024;31(12):e16397
    van Kooten HA; Horton MC; Wenninger S; Babacic H; Schoser B; Lefeuvre C; Taouagh N; Laforet P; Segovia S; Diaz-Manera J; Claeys KG; Mongini T; Musumeci O; Toscano A; Hundsberger T; Brusse E; van Doorn PA; van der Ploeg AT; van der Beek NAME
  • Article: NATURE COMMUNICATIONS. 2023;14(1):5921
    Babacic H; Christ W; Araujo JE; Mermelekas G; Sharma N; Tynell J; Garcia M; Varnaite R; Asgeirsson H; Glans H; Lehtioe J; Gredmark-Russ S; Klingstroem J; Pernemalm M
  • Article: RESPIRATORY RESEARCH. 2023;24(1):62
    Palma Medina LM; Babacic H; Dzidic M; Parke A; Garcia M; Maleki KT; Unge C; Lourda M; Kvedaraite E; Chen P; Muvva JR; Cornillet M; Emgard J; Moll K; Michaelsson J; Flodstrom-Tullberg M; Brighenti S; Buggert M; Mjosberg J; Malmberg K-JK; Sandberg J; Gredmark-Russ S; Rooyackers O; Svensson MJ; Chambers BI; Eriksson L; Pernemalm MK; Bjorkstrom N; Aleman S; Ljunggren H-G; Klingstrom J; Stralin K; Norrby-Teglund A
  • Article: MOLECULAR ONCOLOGY. 2023;17(2):238-260
    Babacic H; Galardi S; Umer HM; Hellstrom M; Uhrbom L; Maturi N; Cardinali D; Pellegatta S; Michienzi A; Trevisi G; Mangiola A; Lehtio J; Ciafre SA; Pernemalm M
  • Article: NEOPLASIA. 2021;23(8):783-791
    Babacic H; Eriksson H; Pernemalm M
  • Article: JOURNAL FOR IMMUNOTHERAPY OF CANCER. 2020;8(1):e000204
    Babacic H; Lehtio J; de Coana YP; Pernemalm M; Eriksson H
  • Article: JOURNAL OF NEUROLOGY. 2019;266(6):1358-1366
    Montagnese F; Babacic H; Eichhorn P; Schoser B
  • Article: JOURNAL OF NEUROLOGY. 2019;266(1):133-147
    Wenninger S; Greckl E; Babacic H; Stahl K; Schoser B
  • Article: JOURNAL OF NEUROMUSCULAR DISEASES. 2018;5(4):451-459
    Baba膷i膰 H; Goldina O; Stahl K; Montagnese F; Jurinovi膰 V; Schoser B; Wenninger S
  • Article: MULTIPLE SCLEROSIS AND RELATED DISORDERS. 2018;25:112-121
    Barin L; Salmen A; Disanto G; Babacic H; Calabrese P; Chan A; Kamm CP; Kesselring J; Kuhle J; Gobbi C; Pot C; Puhan MA; von Wyl V
  • Article: NEUROMUSCULAR DISORDERS. 2018;28(3):229-235
    Jimenez-Moreno AC; Raaphorst J; Babacic H; Wood L; van Engelen B; Lochmueller H; Schoser B; Wenninger S

All other publications

  • Doctoral thesis: 2023
    Babacic H
  • Preprint: BIORXIV. 2022
    Baba膷i膰 H; Galardi S; Umer HM; Cardinali D; Pellegatta S; Hellstr枚m M; Uhrbom L; Maturi N; Michienzi A; Trevisi G; Mangiola A; Lehti枚 J; Ciafr猫 SA; Pernemalm M
  • Letter: ALLERGY. 2022;77(1):296-298
    Blazhevska TB; Babacic H; Sibinovska O; Dobrevski B; Kirijas M; Milanovski G; Arsov T; Petlichkovski A
  • Meeting abstract: ANNALS OF ONCOLOGY. 2020;31:S760
    Eriksson H; Babacic H; Lehtio J; Pernemalm M
  • Preprint: MEDRXIV. 2020
    Baba膷i膰 H; Lehti枚 J; Pernemalm M
  • Meeting abstract: JOURNAL OF CLINICAL ONCOLOGY. 2019;37(15):9574
    Eriksson H; Babacic H; Lehtio J; Pernemalm M
  • Conference publication: NERVENHEILKUNDE. 2019;38(05):286-287
    Montagnese F; Babacic H; Eichhorn P; Schoser B
  • Review: PLOS ONE. 2019;14(2):e0212198
    Babacic H; Mehta A; Merkel O; Schoser B
  • Conference publication: NEUROMUSCULAR DISORDERS. 2018;28:S137
    Wenninger S; Greckl E; Babacic H; Schoser B

Employments

  • Postdoctoral Researcher, Department of Oncology-Pathology, 探花精选, 2023-2026
  • Postdoctoral Researcher, Department of Neurobiology, Care Sciences and Society, 探花精选, 2024-2025

Degrees and Education

  • Degree Of Doctor Of Philosophy, Department of Oncology-Pathology, 探花精选, 2023
  • Master of Science in Epidemiology, Institute for Medical Information Processing, Biometry, and Epidemiology, Ludwig-Maximilians-Universit盲t M眉nchen, 2017
  • Doctor of Medicine, Faculty of Medicine, Saints Cyril and Methodius University of Skopje, 2015

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