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Shilpa Ray

Shilpa Ray

Research Specialist
Visiting address: ANA Futura Laboratory, Alfred Nobels väg 8, 14152 Huddinge
Postal address: H7 Medicin, Huddinge, H7 CIM-CID Sönnerborg Ray, 171 77 Stockholm
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About me

  • Shilpa received her Ph.D. in November 2018 from KIIT University, India, on the identification of serovar-specific virulence factors contributing to the pathogenesis of Salmonella Typhimurium and Salmonella Enteritidis. She joined KI as a postdoctoral researcher in February 2019. Since then, her research has been aimed primarily at understanding the interactions between antiretroviral drugs and gut microbiome in HIV-infected patients and their underlying molecular mechanisms by integrating systems biology approaches with in vitro work. As a postdoctoral researcher, Shilpa expanded her research interests and developed them into independent research topics diverse but complementary to those of her group. Altogether, these topics and her studies aim at reducing bacterial infections, particularly nosocomial ones, caused by antimicrobial resistant bacteria. This includes developing, screening, testing, and repurposing drugs into new antibacterial agents as well as investigating their mechanisms of action and host–pathogen interactions. In 2023, supported by several prestigious competitive research grants obtained during her postdoctoral training (2019–2022) and subsequent research specialist position (2023 onwards), she became a team leader. She currently leads investigations into the microbiome and bacterial infections, with a particular focus on antimicrobial resistance, host–pathogen interactions, and the development of novel therapeutic strategies within her group.

Research

  • Antimicrobial resistance (AMR), Host-pathogen interactions, Gut microbiome patterns in treated HIV patients

Articles

  • Article: SCIENTIFIC REPORTS. 2024;14(1):17820
    Narayanan A; Kieri O; Vesterbacka J; Manoharan L; Chen P; Ghorbani M; Ljunggren H-G; Chen MS; Aleman S; Soennerborg A; Ray S; Nowak P
  • Article: NPJ BIOFILMS AND MICROBIOMES. 2023;9(1):104
    Ray S; Narayanan A; Vesterbacka J; Blennow O; Chen P; Gao Y; Gabarrini G; Ljunggren H-G; Buggert M; Manoharan L; Chen MS; Aleman S; Sonnerborg A; Nowak P
  • Article: INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS. 2023;61(5):106792
    Cena-Diez R; Narayanan A; Ray S; van de Klundert M; Rodriguez JE; Nilvebrant J; Nygren P-A; Vegvari A; van Domselaar R; Sonnerborg A
  • Article: FRONTIERS IN IMMUNOLOGY. 2023;13:1079995
    Ghorbani M; Al-Manei K; Naud S; Healy K; Gabarrini G; Sobkowiak MJ; Chen P; Ray S; Akber M; Muschiol S; Bogdanovic G; Bergman P; Ljungman P; Buggert M; Ljunggren H-G; Pin E; Nowak P; Aleman S; Saellberg Chen M
  • Article: PROTEIN SCIENCE. 2022;31(4):835-849
    Ray S; Pandey NK; Kushwaha GS; Das S; Ganguly AK; Vashi N; Kumar D; Suar M; Bhavesh NS
  • Article: JOURNAL OF VIROLOGY. 2021;95(18):e0047921-10.1128/jvi.00421
    Sperk M; Ambikan AT; Ray S; Singh K; Mikaeloff F; Diez RC; Narayanan A; Vesterbacka J; Nowak P; Sonnerborg A; Neogi U
  • Article: FRONTIERS IN MICROBIOLOGY. 2021;12:667718
    Bai X; Narayanan A; Nowak P; Ray S; Neogi U; Sonnerborg A
  • Article: ACS INFECTIOUS DISEASES. 2021;7(5):1104-1115
    Ray S; Narayanan A; Giske CG; Neogi U; Sonnerborg A; Nowak P
  • Journal article: VIRULENCE. 2020;11(1):247-259
    Das S; Ray S; Arunima A; Sahu B; Suar M
  • Journal article: VIRULENCE. 2020;11(1):295-314
    Arunima A; Swain SK; Ray S; Prusty BK; Suar M
  • Journal article: VIRULENCE. 2018;9(1):348-362
    Das S; Ray S; Ryan D; Sahu B; Suar M
  • Journal article: GUT PATHOGENS. 2018;10:30
    Ray S; Das S; Panda PK; Suar M
  • Journal article: SCIENTIFIC REPORTS. 2016;6:38204
    Jaiswal S; Paul P; Padhi C; Ray S; Ryan D; Dash S; Suar M
  • Journal article: APPLIED AND ENVIRONMENTAL MICROBIOLOGY. 2015;81(23):8054-8065
    Ryan D; Pati NB; Ojha UK; Padhi C; Ray S; Jaiswal S; Singh GP; Mannala GK; Schultze T; Chakraborty T; Suar M
  • Journal article: VACCINE. 2015;33(15):1880-1889
    Vishwakarma V; Sahoo SS; Das S; Ray S; Hardt W-D; Suar M
  • Journal article: GUT PATHOGENS. 2015;7:24
    Jaiswal S; Pati NB; Dubey M; Padhi C; Sahoo PK; Ray S; Arunima A; Mohakud NK; Suar M
  • Journal article: VIRULENCE. 2014;5(2):311-320
    Vishwakarma V; Pati NB; Ray S; Das S; Suar M

All other publications

  • Preprint: RESEARCH SQUARE. 2024
    Narayanan A; Kieri O; Vesterbacka J; Manoharan L; Chen P; Ghorbani M; Ljunggren H-G; Chen MS; Aleman S; Sönnerborg A; Ray S; Nowak P
  • Preprint: RESEARCH SQUARE. 2023
    Ray S; Narayanan A; Vesterbacka J; Blennow O; Chen P; Gao Y; Gabarrini G; Ljunggren H-G; Buggert M; Manoharan L; Chen M; Aleman S; Sönnerborg A; Nowak P
  • Preprint: RESEARCH SQUARE. 2020
    Sperk M; Ambikan A; Ray S; Singh K; Mikaeloff F; Diez RC; Narayanan A; Vesterbacka J; Nowak P; Sönnerborg A; Neogi U

Grants

  • Region Stockholm (CIMED Junioransökan)
    1 January 2025 - 31 December 2027
  • Impact of metabolites and bacterial signatures on gut epithelial integrity in HIV infected Elite controllers
    KI - ̽»¨¾«Ñ¡ Research Foundation Grants
    1 January 2025 - 31 December 2025
  • Region Stockholm (CIMED Senioransökan)
    1 January 2025 - 31 December 2027
  • Swedish Research Council
    1 January 2023 - 31 December 2025
  • Stiftelsen Läkare mot AIDS Forskningsfond
    1 November 2021 - 31 July 2022
  • Are microbiome changes responsible for the weight gain in individuals treated with dolutegravir?
    ̽»¨¾«Ñ¡ Foundation for Virus Research
    1 April 2021 - 31 December 2022
  • Ã…ke Wibergs Stiftelse
    1 January 2021 - 31 December 2023
  • Can antiretroviral drugs be used to treat antibiotic-resistant bacteria?
    KI - ̽»¨¾«Ñ¡ Research Foundation Grants
    1 January 2021 - 1 January 2022

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