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Andrei Kramer-Miehe

Research Specialist
Visiting address: Solnav盲gen 9 - kvarter B4, 17165 Solna
Postal address: C4 Neurovetenskap, C4 Forskning Hellgren Kotaleski, 171 77 Stockholm
Part of:

About me

  • I write little programs that help working with models in systems biology.

    Please don't use the KI email address to contact me. That mail account is not monitored. Instead, use the scilifelab.se address with prefix: andrei.kramer

Research

  • Research description
    I work on software for model handling and parameter estimation:

     

    I especially contribute to the UQSA software in the above repository.


    C for MCMC sampling:

    R package for model transformation and code generation:

    R package for ODE solving:

    Education
    Diploma in Physics

    Dr.-Ing. in Systems Biology

Teaching

  • I have been a teaching assistant for many years in courses for non-linear dynamics for engineering students and computer programming in C and MATLAB for physicists.

Articles

  • Article: NEUROINFORMATICS. 2022;20(1):241-259
    Santos JPG; Pajo K; Trpevski D; Stepaniuk A; Eriksson O; Nair AG; Keller D; Kotaleski JH; Kramer A
  • Journal article: AICHE JOURNAL. 2020;66(4)
    Eisenkolb I; Jensch A; Eisenkolb K; Kramer A; Buchholz PCF; Pleiss J; Spiess A; Radde NE
  • Journal article: BIOINFORMATICS. 2019;35(2):284-292
    Eriksson O; Jauhiainen A; Sasane SM; Kramer A; Nair AG; Sartorius C; Kotaleski JH
  • Journal article: BIOINFORMATICS. 2014;30(20):2991-2992
    Kramer A; Stathopoulos V; Girolami M; Radde N
  • Journal article: BMC BIOINFORMATICS. 2014;15:253
    Kramer A; Calderhead B; Radde N
  • Journal article: BMC BIOINFORMATICS. 2013;14:S2
    Vehlow C; Hasenauer J; Kramer A; Raue A; Hug S; Timmer J; Radde N; Theis FJ; Weiskopf D
  • Journal article: BIOINFORMATICS. 2012;28(18):i535-i541
    Weber P; Kramer A; Dingler C; Radde N
  • Journal article: PROCEDIA COMPUTER SCIENCE. 2010;1(1):1645-1653
    Kramer A; Radde N

All other publications

  • Preprint: 2023
    Kramer A; Milinanni F; Kotaleski JH; Nyquist P; Jauhiainen A; Eriksson O
  • Review: ELIFE. 2022;11:e69013
    Eriksson O; Bhalla US; Blackwell KT; Crook SM; Keller D; Kramer A; Linne M-L; Saudargiene A; Wade RC; Kotaleski JH
  • Preprint: BIORXIV. 2020
    Santos JPG; Pajo K; Trpevski D; Stepaniuk A; Eriksson O; Nair AG; Keller D; Kotaleski JH; Kramer A
  • Conference publication: 2012;:91-98
    Vehlow C; Hasenauer J; Kramer A; Heinrich J; Radde N; Allg枚wer F; Weiskopf D
  • Conference publication: AIP CONFERENCE PROCEEDINGS. 2010;1303(1):68-73
    Kramer A; Radde N; Dubois DM
  • Conference publication: 2010;:493-498
    Kramer A; Hasenauer J; Allg枚wer F; Radde N

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